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amira 6.0 software  (Thermo Fisher)


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    Structured Review

    Thermo Fisher amira 6.0 software
    Amira 6.0 Software, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/amira+6%2E0+software/pm38527652-111-12-15
    Average 90 stars, based on 1 article reviews
    amira 6.0 software - by Bioz Stars, 2026-10
    90/100 stars

    Images

    Related Articles

    Extraction:

    Article Title: Growth and Development at the Sphenoethmoidal Junction in Perinatal Primates.
    Article Snippet: Three-dimensional reconstruction from microCT data From specimens that were microCT scanned, TIFF stacks were imported to Amira 6.0 software (FEI Houston, Inc.) for post-processing.

    Article Title: Lewy pathology in Parkinson’s disease consists of a crowded organellar, membranous medley
    Article Snippet: Semi-automatic 3D color segmentation of the tomograms was performed by user-interactive thresholding and volume rendering using the Amira 6.0 software (FEI).

    Article Title: Short peptide analogs as alternatives to collagen in pro-regenerative corneal implants
    Article Snippet: Selected serial image sequences were extracted from the image data and 3D reconstructions were generated using Amira 6.0 software (FEI, ThermoFisher).

    Article Title: A longitudinal MRI and TSPO PET-based investigation of brain region-specific neuroprotection by diazepam versus midazolam following organophosphate-induced seizures.
    Article Snippet: Image segmentation and extraction of voxel-wise ADC data were performed in the AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA), while voxel-wise ADC metrics were calculated in GraphPad Prism v5.01 (GraphPad Software Inc, La Jolla, CA).

    Article Title: Axial Skeletal Malformations in Genetically Modified Xenopus laevis and Xenopus tropicalis
    Article Snippet: CT images were evaluated using multiplanar reconstructions in Horos (Horosproject.org, Nimble LLC d/b/a Purview, Annapolis, MD) and 3D renderings generated from the CT data with Amira 6.0 software (Thermo-Fisher, Waltham, MA).

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus.
    Article Snippet: Images of the whole brain hemisphere were acquired at 10× magnification using the high-content ImageXpress XL imaging system (Molecular Devices, Sunnyvale, CA, USA) and analyzed using AMIRA 6.0 software (Thermo Fisher).

    Article Title: Is ventriculomegaly and hindbrain herniation seen before and after prenatal neural tube defect repair associated with a worse functional level than anatomical level at birth?
    Article Snippet: Department of Obstetrics & Gynecology, Division of Maternal‐Fetal Medicine, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Lucile Packard Children’s Hospital, Stanford School of Medicine, Palo Alto, California, USA Department of Neurosurgery, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus
    Article Snippet: Image segmentation was performed in AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA, USA) using Paxinos and Watson’s The Rat Brain in Stereotaxic Coordinates ( ) as a guide for anatomical boundaries.

    Software:

    Article Title: Growth and Development at the Sphenoethmoidal Junction in Perinatal Primates.
    Article Snippet: Three-dimensional reconstruction from microCT data From specimens that were microCT scanned, TIFF stacks were imported to Amira 6.0 software (FEI Houston, Inc.) for post-processing.

    Article Title: Lewy pathology in Parkinson’s disease consists of a crowded organellar, membranous medley
    Article Snippet: Semi-automatic 3D color segmentation of the tomograms was performed by user-interactive thresholding and volume rendering using the Amira 6.0 software (FEI).

    Article Title: Short peptide analogs as alternatives to collagen in pro-regenerative corneal implants
    Article Snippet: Selected serial image sequences were extracted from the image data and 3D reconstructions were generated using Amira 6.0 software (FEI, ThermoFisher).

    Article Title: A longitudinal MRI and TSPO PET-based investigation of brain region-specific neuroprotection by diazepam versus midazolam following organophosphate-induced seizures.
    Article Snippet: Image segmentation and extraction of voxel-wise ADC data were performed in the AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA), while voxel-wise ADC metrics were calculated in GraphPad Prism v5.01 (GraphPad Software Inc, La Jolla, CA).

    Article Title: Axial Skeletal Malformations in Genetically Modified Xenopus laevis and Xenopus tropicalis
    Article Snippet: CT images were evaluated using multiplanar reconstructions in Horos (Horosproject.org, Nimble LLC d/b/a Purview, Annapolis, MD) and 3D renderings generated from the CT data with Amira 6.0 software (Thermo-Fisher, Waltham, MA).

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus.
    Article Snippet: Images of the whole brain hemisphere were acquired at 10× magnification using the high-content ImageXpress XL imaging system (Molecular Devices, Sunnyvale, CA, USA) and analyzed using AMIRA 6.0 software (Thermo Fisher).

    Article Title: Is ventriculomegaly and hindbrain herniation seen before and after prenatal neural tube defect repair associated with a worse functional level than anatomical level at birth?
    Article Snippet: Department of Obstetrics & Gynecology, Division of Maternal‐Fetal Medicine, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Lucile Packard Children’s Hospital, Stanford School of Medicine, Palo Alto, California, USA Department of Neurosurgery, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus
    Article Snippet: Image segmentation was performed in AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA, USA) using Paxinos and Watson’s The Rat Brain in Stereotaxic Coordinates ( ) as a guide for anatomical boundaries.

    Imaging:

    Article Title: Growth and Development at the Sphenoethmoidal Junction in Perinatal Primates.
    Article Snippet: Three-dimensional reconstruction from microCT data From specimens that were microCT scanned, TIFF stacks were imported to Amira 6.0 software (FEI Houston, Inc.) for post-processing.

    Article Title: Lewy pathology in Parkinson’s disease consists of a crowded organellar, membranous medley
    Article Snippet: Semi-automatic 3D color segmentation of the tomograms was performed by user-interactive thresholding and volume rendering using the Amira 6.0 software (FEI).

    Article Title: Short peptide analogs as alternatives to collagen in pro-regenerative corneal implants
    Article Snippet: Selected serial image sequences were extracted from the image data and 3D reconstructions were generated using Amira 6.0 software (FEI, ThermoFisher).

    Article Title: A longitudinal MRI and TSPO PET-based investigation of brain region-specific neuroprotection by diazepam versus midazolam following organophosphate-induced seizures.
    Article Snippet: Image segmentation and extraction of voxel-wise ADC data were performed in the AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA), while voxel-wise ADC metrics were calculated in GraphPad Prism v5.01 (GraphPad Software Inc, La Jolla, CA).

    Article Title: Axial Skeletal Malformations in Genetically Modified Xenopus laevis and Xenopus tropicalis
    Article Snippet: CT images were evaluated using multiplanar reconstructions in Horos (Horosproject.org, Nimble LLC d/b/a Purview, Annapolis, MD) and 3D renderings generated from the CT data with Amira 6.0 software (Thermo-Fisher, Waltham, MA).

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus.
    Article Snippet: Images of the whole brain hemisphere were acquired at 10× magnification using the high-content ImageXpress XL imaging system (Molecular Devices, Sunnyvale, CA, USA) and analyzed using AMIRA 6.0 software (Thermo Fisher).

    Article Title: Is ventriculomegaly and hindbrain herniation seen before and after prenatal neural tube defect repair associated with a worse functional level than anatomical level at birth?
    Article Snippet: Department of Obstetrics & Gynecology, Division of Maternal‐Fetal Medicine, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Lucile Packard Children’s Hospital, Stanford School of Medicine, Palo Alto, California, USA Department of Neurosurgery, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus
    Article Snippet: Image segmentation was performed in AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA, USA) using Paxinos and Watson’s The Rat Brain in Stereotaxic Coordinates ( ) as a guide for anatomical boundaries.

    Generated:

    Article Title: Growth and Development at the Sphenoethmoidal Junction in Perinatal Primates.
    Article Snippet: Three-dimensional reconstruction from microCT data From specimens that were microCT scanned, TIFF stacks were imported to Amira 6.0 software (FEI Houston, Inc.) for post-processing.

    Article Title: Lewy pathology in Parkinson’s disease consists of a crowded organellar, membranous medley
    Article Snippet: Semi-automatic 3D color segmentation of the tomograms was performed by user-interactive thresholding and volume rendering using the Amira 6.0 software (FEI).

    Article Title: Short peptide analogs as alternatives to collagen in pro-regenerative corneal implants
    Article Snippet: Selected serial image sequences were extracted from the image data and 3D reconstructions were generated using Amira 6.0 software (FEI, ThermoFisher).

    Article Title: A longitudinal MRI and TSPO PET-based investigation of brain region-specific neuroprotection by diazepam versus midazolam following organophosphate-induced seizures.
    Article Snippet: Image segmentation and extraction of voxel-wise ADC data were performed in the AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA), while voxel-wise ADC metrics were calculated in GraphPad Prism v5.01 (GraphPad Software Inc, La Jolla, CA).

    Article Title: Axial Skeletal Malformations in Genetically Modified Xenopus laevis and Xenopus tropicalis
    Article Snippet: CT images were evaluated using multiplanar reconstructions in Horos (Horosproject.org, Nimble LLC d/b/a Purview, Annapolis, MD) and 3D renderings generated from the CT data with Amira 6.0 software (Thermo-Fisher, Waltham, MA).

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus.
    Article Snippet: Images of the whole brain hemisphere were acquired at 10× magnification using the high-content ImageXpress XL imaging system (Molecular Devices, Sunnyvale, CA, USA) and analyzed using AMIRA 6.0 software (Thermo Fisher).

    Article Title: Is ventriculomegaly and hindbrain herniation seen before and after prenatal neural tube defect repair associated with a worse functional level than anatomical level at birth?
    Article Snippet: Department of Obstetrics & Gynecology, Division of Maternal‐Fetal Medicine, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Texas Children’s Hospital, Houston, Texas, USA Department of Radiology, Lucile Packard Children’s Hospital, Stanford School of Medicine, Palo Alto, California, USA Department of Neurosurgery, Baylor College of Medicine & Texas Children’s Hospital, Houston, Texas, USA

    Article Title: Time- and region-dependent blood-brain barrier impairment in a rat model of organophosphate-induced status epilepticus
    Article Snippet: Image segmentation was performed in AMIRA 6.0 software (Thermo Fisher Scientific, Waltham, MA, USA) using Paxinos and Watson’s The Rat Brain in Stereotaxic Coordinates ( ) as a guide for anatomical boundaries.



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